Doctor Lawrence J. Lesko

He used Agilent instruments (a combination of highly accurate liquid chromatography and mass spectrometry systems) to gather mountains of data, then used Agilent software (MassHunter, Mass Profiler Professional, and Pathway Architect) to analyze it.

“We know that cisplatin, a chemotherapy drug widely used in oncology, gets into the kidneys through a transport mechanism called OCT 2 (short for organic cation transporter 2), which takes it from the blood into the renal cortex,” Lesko explains. “Now here’s the really cool thing. We figure, ‘OK, the drug is taken up by OCT 2. What if we gave an antidote that blocks OCT2 transport before the cisplatin?’”

They chose cimetidine, an over-the-counter remedy for gastric upset, as a possible solution.

“Using our model, we simulated co-administration and were able to simulate cisplatin plasma levels and show a significant reduction of cisplatin in the renal cortex. Where we have to go next is an opportunistic in vivo study, probably in rodents, to validate our simulation, but ideally in patients,” he says.

The end game? “Reduce the toxicity of a drug by giving a second drug a priori that minimizes the toxicity mechanistically—in this case by blocking the OCT 2 pathway,” Lesko says.

In metabolomics, the key obstacle, he notes, is deciphering the functionality of vast quantities of data.

“You get terabytes of data from Agilent MassHunter and so on, so our main challenge now is to interpret the data in a mechanistic way that would give us insight into how these drugs become toxic. What are the off-target and on-target pathways that are being affected by the drug and what is the mechanism by which these pathways are being affected? Is it the drug binding to receptors or proteins? Are there stress pathways of these drugs? What exactly are the metabolites—the end products of the pathways—telling us? How can we be sure that these metabolite changes are due to kidney damage versus heart damage, for example?” Lesko says.

“We’re looking at the pathways and asking questions: If we see a change in lipids, are the kidney and lipid metabolism in the organ associated with toxicity, or if there’s a change in amino acids is this reflecting mitochondrial damage in the kidney? So that’s where we are. Those are our biggest challenges right now: looking at the data and correlating metabolite changes with the mechanisms.”

“The intersection between metabolomics, physiologically based modeling, and molecular-level pharmacology is what brought us to this point, to have something pretty exciting. There’s still a lot of work to be done, but we got this far by virtue of that intersection,” Lesko says.

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